STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
synprSynaptoporin. (283 aa)    
Predicted Functional Partners:
vamp2
Vesicle-associated membrane protein 2.
   
 0.754
LOC110000474
Zgc:92912.
   
 0.754
nagk
N-acetylglucosamine kinase.
     
 0.673
hoga1
4-hydroxy-2-oxoglutarate aldolase 1; Belongs to the DapA family.
   
 
  0.533
npl
N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase); Belongs to the DapA family.
   
 
  0.533
LOC109998058
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
     
 0.526
LOC109998056
Epimerase_2 domain-containing protein.
     
 0.526
hexa
Beta-hexosaminidase.
   
 
  0.525
hexb
Beta-hexosaminidase.
   
 
  0.525
LOC109998059
N-acetylneuraminic acid synthase a.
     
 0.518
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.