STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109984299Fibrinogen C-terminal domain-containing protein. (299 aa)    
Predicted Functional Partners:
LOC109979877
Uncharacterized protein.
 
   
  0.832
fgg
Fibrinogen gamma chain.
   
   
0.735
ENSLBEP00000035454
Uncharacterized protein.
 
   
  0.720
met
MET proto-oncogene, receptor tyrosine kinase.
   
 
  0.681
mst1r
Macrophage stimulating 1 receptor b.
   
 
  0.681
LOC109980643
Macrophage stimulating 1 receptor a.
   
 
  0.681
LOC109977003
Uncharacterized protein.
   
 0.654
APOH
Uncharacterized protein.
   
 0.654
APOH-2
Uncharacterized protein.
   
 0.654
ENSLBEP00000035471
Uncharacterized protein.
 
 
 
  0.610
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.