STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000019792Transforming, acidic coiled-coil containing protein 1. (718 aa)    
Predicted Functional Partners:
LOC109994457
Malate synthase-like.
   
 
 0.896
ckap5
Cytoskeleton associated protein 5.
    
 
 0.782
LOC109997958
TACC_C domain-containing protein.
    
 
0.713
ENSLBEP00000028819
TACC_C domain-containing protein.
    
 
0.680
ENSLBEP00000026267
Uncharacterized protein.
    
 0.650
rb1cc1
RB1-inducible coiled-coil 1.
    
 
 0.567
LOC109985360
BRCA1 associated RING domain 1.
    
 0.563
azi2
5-azacytidine induced 2.
    
   0.554
ENSLBEP00000013216
Uncharacterized protein.
    
  0.552
LOC110002597
P53-induced death domain protein 1.
    
  0.552
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.