STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
synj1Synaptojanin 1. (1449 aa)    
Predicted Functional Partners:
ENSLBEP00000004755
Uncharacterized protein.
    
 
 0.957
ENSLBEP00000004788
Uncharacterized protein.
    
 
 0.957
LOC109990056
Intersectin 2a.
    
 
 0.957
LOC109985484
Inositol polyphosphate phosphatase-like 1b.
    
0.935
LOC109987944
Intersectin 1 (SH3 domain protein).
    
 
 0.935
inppl1
Inositol polyphosphate phosphatase-like 1a.
    
0.935
LOC109993643
SAC1 like phosphatidylinositide phosphatase a.
    
0.906
LOC110003253
Phosphatidylinositol 4-kinase, catalytic, beta; Belongs to the PI3/PI4-kinase family.
    
 0.905
ENSLBEP00000002477
SAC domain-containing protein.
    
0.901
LOC109999527
SAC1 like phosphatidylinositide phosphatase b.
    
0.901
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.