STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000020148Retinol binding protein 2b, cellular; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (135 aa)    
Predicted Functional Partners:
lrat
Lecithin retinol acyltransferase a.
     
 0.710
LOC109988302
LRAT domain-containing protein.
     
 0.689
nmnat2
Nicotinamide nucleotide adenylyltransferase 2.
     
 0.685
LOC109982556
Uncharacterized protein.
   
  0.662
LOC109981627
Nicotinamide riboside kinase 1.
   
  0.662
nmnat1
Nicotinamide-nucleotide adenylyltransferase.
 
   
 0.662
LOC109995997
Aldo-keto reductase family 1, member A1a (aldehyde reductase).
   
  0.558
akr1a1
Aldo-keto reductase family 1, member A1b (aldehyde reductase).
   
  0.551
LOC110004693
Aldo_ket_red domain-containing protein.
   
  0.550
LOC110005275
Aldo_ket_red domain-containing protein.
   
  0.550
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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