STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
npm3Nucleophosmin/nucleoplasmin, 3. (161 aa)    
Predicted Functional Partners:
LOC109999736
Nucleoplasmin domain-containing protein.
  
 
0.789
LOC109981445
Nucleophosmin 1a.
   
 
0.789
mrpl41
Mitochondrial ribosomal protein L41.
    
  0.575
mrpl11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
  0.530
ENSLBEP00000015184
Glyco_transf_41 domain-containing protein.
   
 
 0.521
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
   
 
 0.521
mrpl3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
  0.514
LOC109987197
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.464
LOC109977546
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
    
 0.440
LOC110001527
Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
    
 0.440
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.