STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000020408NACHT domain-containing protein. (618 aa)    
Predicted Functional Partners:
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.521
atg16l1
ATG16 autophagy related 16-like 1 (S. cerevisiae).
    
 0.520
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
  0.514
LOC109989387
RAN binding protein 2.
   
 
  0.485
rps27a
Ribosomal protein S27a.
    
  0.466
ENSLBEP00000011161
RNAse_Pc domain-containing protein; Belongs to the pancreatic ribonuclease family.
    
   0.437
il1b
Interleukin-1.
    
 0.424
rfxap
Regulatory factor X-associated protein.
     
 0.413
nek6
NIMA-related kinase 6; Belongs to the protein kinase superfamily.
    
  0.400
nek7
NIMA-related kinase 7; Belongs to the protein kinase superfamily.
    
  0.400
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.