STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110004666Si:ch211-137a8.4. (725 aa)    
Predicted Functional Partners:
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.795
pold1
DNA polymerase.
   
 0.765
LOC109996690
Survival of motor neuron 1, telomeric.
    
 0.745
snrpd2
Small nuclear ribonucleoprotein Sm D2.
    
 0.722
fancm
Uncharacterized protein.
    
 0.716
snrpf
Small nuclear ribonucleoprotein polypeptide F.
    
  0.700
snrpg
Small nuclear ribonucleoprotein G.
    
  0.687
ENSLBEP00000029074
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.652
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.643
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.640
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.