STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109998215Uncharacterized protein. (987 aa)    
Predicted Functional Partners:
arhgap10
Rho GTPase activating protein 10.
  
 
  
0.602
LOC109994148
Cell division cycle 42.
    
 0.534
CDC42
Cell division cycle 42.
    
 0.534
LOC109980884
Ras homolog family member Ca.
    
 0.523
LOC109984913
Uncharacterized protein.
    
 0.523
LOC109993560
Uncharacterized protein.
    
 0.523
LOC109984918
Uncharacterized protein.
    
 0.523
LOC109981514
Uncharacterized protein.
    
 0.523
RHOB
Ras homolog family member B.
    
 0.523
LOC109990297
Uncharacterized protein.
    
 0.523
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.