STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114917854Uncharacterized protein. (427 aa)    
Predicted Functional Partners:
LOC109975536
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.892
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.892
ENSLBEP00000031686
Uncharacterized protein.
    
 0.892
ak9
Adenylate kinase 9.
   
 0.859
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
    
 0.797
LOC109998333
Anaphase promoting complex subunit 1.
    
 0.796
anapc4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
    
 0.796
anapc5
Anaphase promoting complex subunit 5.
   
 0.795
ENSLBEP00000006652
TROVE domain-containing protein.
   
 0.793
ENSLBEP00000016000
Bardet-Biedl syndrome 9.
    
 0.781
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.