STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000020718PBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (245 aa)    
Predicted Functional Partners:
LOC109985820
Voltage-dependent calcium channel gamma-4 subunit; Regulates the activity of L-type calcium channels that contain CACNA1C as pore-forming subunit (By similarity). Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs), including GRIA1 and GRIA4. Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization and by mediating their resensitization; Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily.
    
 0.926
CNIH2
Cornichon family AMPA receptor auxiliary protein 2.
    
 0.909
LOC109997816
Cornichon family AMPA receptor auxiliary protein 3.
    
 0.909
LOC109995786
Lig_chan-Glu_bd domain-containing protein.
 
      0.896
ENSLBEP00000004978
PDZ domain-containing protein.
    
 0.892
LOC109981017
Glutamate receptor interacting protein 2a.
    
 0.892
grip2
Glutamate receptor interacting protein 2b.
    
 0.892
LOC110002890
Uncharacterized protein.
  
0.866
LOC109981031
Glutamate receptor, ionotropic, AMPA 1a.
  
0.865
LOC109981486
Glutamate receptor, ionotropic, AMPA 3a.
  
0.858
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.