STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109993679Si:dkey-17m8.1. (992 aa)    
Predicted Functional Partners:
map2k7
Mitogen-activated protein kinase kinase 7.
    
 0.941
LOC109993502
Mitogen-activated protein kinase.
   
 0.881
map2k4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.880
ENSLBEP00000003355
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.789
ENSLBEP00000032958
ADP-ribosylation factor 6a; Belongs to the small GTPase superfamily. Arf family.
    
 0.789
LOC109992271
Mitogen-activated protein kinase.
   
 0.763
LOC109990744
Mitogen-activated protein kinase.
   
 0.763
LOC109990779
Mitogen-activated protein kinase.
   
 0.763
LOC109987300
Mitogen-activated protein kinase kinase 4b; Belongs to the protein kinase superfamily.
    
 0.755
ENSLBEP00000038324
Uncharacterized protein.
    
 0.755
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.