STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35e3Uncharacterized protein. (619 aa)    
Predicted Functional Partners:
LOC109984238
Ras association domain family member 5.
     
 0.857
LOC109990457
F-box and WD repeat domain containing 11a.
   
 
  0.826
cunh15orf40
Zgc:193812.
   
    0.794
mdm2
MDM2 proto-oncogene; Belongs to the MDM2/MDM4 family.
     
 0.728
LOC109994917
ANK_REP_REGION domain-containing protein.
    
  0.721
mdm4
MDM4 regulator of p53; Belongs to the MDM2/MDM4 family.
     
 0.718
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
 
    
 0.595
slc35c1
Solute carrier family 35 member C1.
      
 0.558
slc35g1
Solute carrier family 35 member G1.
    
 
 0.555
rnf217
RBR-type E3 ubiquitin transferase.
      
 0.545
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.