STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110002516Uncharacterized protein. (794 aa)    
Predicted Functional Partners:
pdpk1
3-phosphoinositide dependent protein kinase 1b.
    
0.904
LOC109983404
Im:7152348.
    
 0.819
LOC109980884
Ras homolog family member Ca.
    
 0.796
LOC109984913
Uncharacterized protein.
    
 0.796
LOC109993560
Uncharacterized protein.
    
 0.796
LOC109984918
Uncharacterized protein.
    
 0.796
LOC109981514
Uncharacterized protein.
    
 0.796
RHOB
Ras homolog family member B.
    
 0.796
LOC109990297
Uncharacterized protein.
    
 0.796
rnd3
Rho family GTPase 3a.
    
 0.795
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.