STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNIH1Cornichon family AMPA receptor auxiliary protein 1. (173 aa)    
Predicted Functional Partners:
tmed10
Transmembrane p24 trafficking protein 10.
   
 0.838
LOC109981486
Glutamate receptor, ionotropic, AMPA 3a.
    
 0.800
LOC109996473
Uncharacterized protein.
    
 0.800
LOC110002890
Uncharacterized protein.
    
 0.800
LOC109981031
Glutamate receptor, ionotropic, AMPA 1a.
    
 0.800
gria2
Glutamate receptor, ionotropic, AMPA 2b.
    
 0.800
ENSLBEP00000020718
PBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 0.800
ENSLBEP00000023398
Uncharacterized protein.
    
 0.800
ENSLBEP00000025365
PBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 0.800
LOC109998953
Uncharacterized protein.
    
 0.800
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.