STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109985917Aminotran_1_2 domain-containing protein. (477 aa)    
Predicted Functional Partners:
got2
Aspartate aminotransferase.
  
 0.916
LOC109991423
Serine--pyruvate aminotransferase.
  
 0.910
LOC109982084
Serine--pyruvate aminotransferase.
  
 0.910
LOC109994457
Malate synthase-like.
  
 
 0.898
ENSLBEP00000007622
Fumarate hydratase.
  
 0.888
LOC110001533
Glutamic-oxaloacetic transaminase 1 like 1.
  
 0.883
GOT1
Aspartate aminotransferase.
  
 0.883
got1
Aspartate aminotransferase.
  
 0.883
LOC109990792
Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.879
LOC109990800
Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.879
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.