STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tymsThymidylate synthetase. (325 aa)    
Predicted Functional Partners:
dhfr
Dihydrofolate reductase.
 
 
 0.994
LOC109989984
Zgc:153031.
 
 
 0.992
LOC109976991
Dihydrofolate reductase-like.
 
 
 0.992
tk1
Thymidine kinase.
  
 
 0.987
dut
Deoxyuridine triphosphatase.
  
 0.984
mtfmt
Mitochondrial methionyl-tRNA formyltransferase.
  
 
 0.973
ppcdc
Phosphopantothenoylcysteine decarboxylase.
   
 0.970
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.963
slc25a42
Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
 0.963
SLC25A42
Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
 0.963
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.