STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddit4DNA-damage-inducible transcript 4. (227 aa)    
Predicted Functional Partners:
LOC109984214
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
 
 0.931
tsc2
TSC complex subunit 2.
     
 0.924
ENSLBEP00000010675
Uncharacterized protein.
   
 
 0.876
LOC109985666
TSC complex subunit 1b.
   
 
 0.876
LOC110000981
TBC1 domain family, member 7.
     
 0.857
hace1
HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1.
    
   0.849
ENSLBEP00000001250
Uncharacterized protein.
  
  
 
0.847
LOC109996700
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
 0.748
LOC109998952
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2; Belongs to the 14-3-3 family.
   
 0.748
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 
 0.743
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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