STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110003043Uncharacterized protein. (322 aa)    
Predicted Functional Partners:
snf8
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
     
  0.602
vps36
Vacuolar protein sorting 36 homolog.
     
  0.602
LOC109979052
Vacuolar protein sorting 25 homolog.
     
  0.573
vps25
Vacuolar protein sorting 25 homolog.
     
  0.573
LOC109989575
MABP domain-containing protein.
     
  0.524
vps37b
Zgc:114173.
     
  0.487
vps37c
VPS37C subunit of ESCRT-I.
     
  0.487
LOC109993955
Si:ch211-284f22.3.
     
  0.487
vps37a
VPS37A subunit of ESCRT-I.
     
  0.487
mvb12b
Multivesicular body subunit 12Ba.
     
  0.478
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.