STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ripk1Receptor (TNFRSF)-interacting serine-threonine kinase 1, like. (683 aa)    
Predicted Functional Partners:
tradd
Tnfrsf1a-associated via death domain.
   
 0.996
LOC109998157
Uncharacterized protein; Belongs to the protein kinase superfamily.
  
 
0.994
fadd
Uncharacterized protein.
   
 0.994
LOC109995578
Receptor-interacting serine-threonine kinase 3.
  
 
0.994
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
   
 0.991
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.987
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.987
LOC109995961
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.983
LOC109995799
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.982
LOC109975928
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.982
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.