STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfap2bTranscription factor AP-2 beta. (446 aa)    
Predicted Functional Partners:
yeats4
YEATS domain containing 4.
    
 0.740
LOC110001704
DEK_C domain-containing protein.
    
 0.723
wwox
Uncharacterized protein.
    
 0.706
WWOX
WW domain containing oxidoreductase.
    
 0.706
LOC109981445
Nucleophosmin 1a.
   
  0.698
LOC109999736
Nucleoplasmin domain-containing protein.
   
  0.697
KCTD15
Potassium channel tetramerization domain containing 15.
    
 0.687
ENSLBEP00000007979
BTB_2 domain-containing protein.
    
 0.687
KCTD15-3
Potassium channel tetramerization domain containing 15a.
    
 0.687
LOC109982514
BTB domain-containing protein.
    
 0.687
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.