STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
taldo1Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (361 aa)    
Predicted Functional Partners:
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
  
 0.996
LOC109997375
Transketolase a.
  
 0.992
LOC109984886
Transketolase b.
  
 0.992
TKT
Transketolase.
  
 0.992
pgd
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
 0.988
tpi1
Triosephosphate isomerase.
  
 0.979
gpi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.976
LOC109978870
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.976
LOC109998719
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.976
LOC110004535
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.974
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.