STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109988419Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (739 aa)    
Predicted Functional Partners:
kif3a
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
  
 
0.978
LOC109999793
Kinesin-associated protein 3a.
   
 0.962
KIFAP3
Kinesin associated protein 3.
   
 0.962
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.790
uchl5
Ubiquitin carboxyl-terminal hydrolase.
    
 0.787
bap1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.787
ift46
Intraflagellar transport 46 homolog (Chlamydomonas).
  
  
 0.771
IFT122
Intraflagellar transport 122.
   
 0.756
ift88
Intraflagellar transport 88 homolog.
    
 0.756
ift20
Intraflagellar transport 20 homolog (Chlamydomonas).
    
 0.755
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.