STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110003020Melanin-concentrating hormone receptor 1b. (364 aa)    
Predicted Functional Partners:
pmch
Uncharacterized protein.
     
 0.898
LOC109985695
Pro-melanin-concentrating hormone, like.
     
 0.898
LOC109999191
Melanin-concentrating hormone receptor 1a.
  
  
 
0.841
bbs1
Bardet-Biedl syndrome 1.
     
 0.724
bbs2
Bardet-Biedl syndrome 2 protein homolog.
    
 0.721
bbs4
Bardet-Biedl syndrome 4.
     
 0.708
ENSLBEP00000033866
Uncharacterized protein.
    
  0.703
LOC110005997
Uncharacterized protein.
    
 0.683
ENSLBEP00000032583
Uncharacterized protein.
    
 0.683
POMC
Proopiomelanocortin.
    
 0.683
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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