STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdk3Protein-serine/threonine kinase. (406 aa)    
Predicted Functional Partners:
dlat
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
 0.927
pdhb
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.919
pdhx
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.893
dld
Dihydrolipoyl dehydrogenase.
  
 0.875
map3k4
Mitogen-activated protein kinase kinase kinase 4.
    
 0.842
ENSLBEP00000027248
Uncharacterized protein.
    
 0.842
ENSLBEP00000027326
Uncharacterized protein.
    
 0.842
ENSLBEP00000001163
Tenascin C.
     
 0.838
ENSLBEP00000012652
Fibrinogen C-terminal domain-containing protein.
     
 0.838
tnn
Tenascin N.
     
 0.838
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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