STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lnx2Ligand of numb-protein X 2a. (755 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
  0.859
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.850
mpp7
Membrane protein, palmitoylated 7a (MAGUK p55 subfamily member 7); Belongs to the MAGUK family.
    
 0.778
mpp3
Membrane protein, palmitoylated 3a (MAGUK p55 subfamily member 3); Belongs to the MAGUK family.
    
 0.778
mpp5
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
    
 0.778
LOC109997785
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.778
LOC109987938
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.778
MPP5
Membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
    
 0.778
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.767
ubb
Ubiquitin B.
    
  0.760
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.