STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109994280Uncharacterized protein. (1128 aa)    
Predicted Functional Partners:
LOC109998255
Sharpin and rbck1 related.
   
 0.984
LOC109997240
RanBP-type and C3HC4-type zinc finger containing 1.
   
 0.984
ENSLBEP00000016635
RanBP2-type domain-containing protein.
    
 0.981
LOC109985933
SHANK-associated RH domain interacting protein.
    
 0.981
otulin
OTU deubiquitinase with linear linkage specificity a.
    
 0.973
ENSLBEP00000008892
Uncharacterized protein.
    
 0.967
ubb
Ubiquitin B.
   
 0.951
rps27a
Ribosomal protein S27a.
   
 0.949
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.919
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.907
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.