STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlnrd1Talin rod domain containing 1. (354 aa)    
Predicted Functional Partners:
vcl
Vinculin.
   
 0.949
ENSLBEP00000010466
Uncharacterized protein.
   
 0.949
LOC110002537
Vinculin a.
   
 0.949
APBB1IP
Uncharacterized protein.
    
 0.931
apbb1ip
Amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein.
    
 0.931
itgb4
Integrin beta.
   
 0.919
itgb8
Integrin beta; Belongs to the integrin beta chain family.
   
 0.918
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.918
ctnnal1
Catenin (cadherin-associated protein), alpha-like 1.
   
 0.847
ENSLBEP00000004057
Uncharacterized protein.
   
 0.847
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.