STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109981221Opsin 4xa. (410 aa)    
Predicted Functional Partners:
LOC109999919
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.743
ENSLBEP00000033866
Uncharacterized protein.
    
  0.703
LOC109982495
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.660
LOC110001543
Arrestin 3a, retinal (X-arrestin).
   
 0.650
LOC110000933
Arrestin beta 2.
   
 0.647
LOC109995255
Arrestin, beta 2a.
   
 0.647
ENSLBEP00000012533
Arrestin_C domain-containing protein.
   
 0.647
ENSLBEP00000015316
Arrestin_C domain-containing protein.
   
 0.647
LOC110003817
Arrestin_C domain-containing protein.
   
 0.647
LOC110004050
Arrestin, beta 1.
   
 0.647
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (30%) [HD]