STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gramd2aGRAM domain containing 2A. (362 aa)    
Predicted Functional Partners:
LOC109991070
Sodium channel, voltage-gated, type IV, beta a.
    
 0.721
LOC109981412
Myelin protein zero-like 2b.
    
 0.649
LOC109975524
Ig-like domain-containing protein.
    
 0.649
scn2b
Sodium channel, voltage-gated, type II, beta.
    
 0.649
LOC109991898
Ig-like domain-containing protein.
    
 0.649
LOC109981483
Sodium channel, voltage-gated, type IV, beta b.
    
 0.597
copg2
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
   0.592
LOC109986048
Ubiquitin-conjugating enzyme E2Q family member 1.
   
    0.514
LOC110002812
Ubiquitin-conjugating enzyme E2Q family member 2.
   
    0.514
LOC109997643
Protein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily.
    
  0.486
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.