STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtfmtMitochondrial methionyl-tRNA formyltransferase. (360 aa)    
Predicted Functional Partners:
LOC109977443
Uncharacterized protein.
  
 
 0.975
LOC109996535
Uncharacterized protein.
  
 
 0.975
LOC109991588
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like.
  
 
 0.975
tyms
Thymidylate synthetase.
  
 
 0.973
pdf
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family.
  
 0.959
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 
 0.954
gart
Phosphoribosylglycinamide formyltransferase.
    
 0.945
mthfr
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
    
 0.940
mthfd1
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b.
    
 0.936
LOC109983264
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like.
    
 0.932
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.