STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (910 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.907
CDH2-2
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
  
  
 
0.840
LOC109995768
Uncharacterized protein.
    
 0.812
LOC109990637
Junction plakoglobin a.
    
 0.812
CTNND1
Catenin delta 1.
    
 0.811
LOC109989818
Catenin (cadherin-associated protein), delta 1.
    
 0.811
LOC109999103
ARVCF delta catenin family member b.
    
 0.810
LOC109982422
Uncharacterized protein.
    
 0.773
PKP4
Plakophilin 4.
    
 0.747
LOC109993903
Catenin (cadherin-associated protein), delta 2b.
    
 0.747
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.