STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc30a5Solute carrier family 30 member 5. (777 aa)    
Predicted Functional Partners:
SLC30A6
Solute carrier family 30 member 6.
  
 
0.915
LOC110005085
Solute carrier family 39 member 7.
  
 0.692
slc39a13
Solute carrier family 39 member 13.
   
 0.676
LOC109979208
Solute carrier family 30 member 9.
  
 
 0.643
LOC109975852
Solute carrier family 39 member 8.
  
 0.620
slc39a9
Solute carrier family 39 member 9.
   
 
 0.593
SLC39A11
Solute carrier family 39 member 11.
   
 0.591
LOC109993409
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
   
  
 0.585
TMEM19
Transmembrane protein 19.
  
  
 0.555
LOC109989132
Solute carrier family 39 member 14.
  
 0.553
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.