STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109987340RRM domain-containing protein. (1458 aa)    
Predicted Functional Partners:
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.804
mst1r
Macrophage stimulating 1 receptor b.
    
  0.804
LOC109980643
Macrophage stimulating 1 receptor a.
    
  0.804
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.623
wdr90
WD repeat domain 90.
    
 0.620
ENSLBEP00000033866
Uncharacterized protein.
    
  0.581
ENSLBEP00000028457
Uncharacterized protein.
    
  0.528
sned1
Sushi, nidogen and EGF-like domains 1.
    
  0.528
LOC109986693
Lymphocyte antigen 6 family member M6.
    
  0.511
ENSLBEP00000028412
Uncharacterized protein.
  
 
  0.506
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.