STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc59Coiled-coil domain containing 59. (275 aa)    
Predicted Functional Partners:
llph
LLP homolog, long-term synaptic facilitation factor.
   
    0.880
rpp30
Ribonuclease P/MRP 30 subunit.
   
 
  0.842
pop5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 
  0.829
denr
Density-regulated protein; Belongs to the DENR family.
   
    0.730
ENSLBEP00000014688
Ribonuclease P and MRP subunit p25, b.
   
 
  0.662
ENSLBEP00000017579
Alba domain-containing protein.
   
 
  0.662
LOC109978698
Ribonuclease P/MRP 25 subunit-like.
   
 
  0.662
ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
  0.616
optn
Optineurin.
    
  0.616
CCDC58
Coiled-coil domain containing 58.
   
    0.587
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.