STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109990294Bassoon (presynaptic cytomatrix protein) b. (3089 aa)    
Predicted Functional Partners:
fads2
Fatty acid desaturase 2.
     
 0.739
LOC109998683
Piccolo presynaptic cytomatrix protein a.
  
0.675
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.671
LOC109981894
Stearoyl-CoA desaturase b; Belongs to the fatty acid desaturase type 1 family.
    
 0.645
LOC109992983
Stearoyl-CoA desaturase; Belongs to the fatty acid desaturase type 1 family.
    
 0.645
PCLO
Piccolo presynaptic cytomatrix protein.
   
0.645
TECR
Trans-2,3-enoyl-CoA reductase.
    
 0.634
tecr
Trans-2,3-enoyl-CoA reductase b.
    
 0.634
LOC109989263
Trans-2,3-enoyl-CoA reductase a.
    
 0.634
ENSLBEP00000032710
Trans-2,3-enoyl-CoA reductase-like 2a.
    
 0.634
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.