STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109986838Solute carrier family 39 member 1. (310 aa)    
Predicted Functional Partners:
LOC109985966
SAMM50 sorting and assembly machinery component.
    
 
 0.781
samm50
Sorting and assembly machinery component 50 homolog, like.
    
 
 0.781
LOC109980106
Metaxin.
    
 
 0.776
mtx3
Metaxin.
    
 
 0.776
LOC109986668
Zgc:86598; Belongs to the protein kinase superfamily.
    
 0.706
csnk2a2
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.706
LOC110001699
Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily.
    
 0.706
LOC109977922
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.706
ENSLBEP00000026290
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.706
LOC109988165
Casein kinase 2, alpha 4 polypeptide; Belongs to the protein kinase superfamily.
    
 0.706
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.