STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncoa3Uncharacterized protein. (1530 aa)    
Predicted Functional Partners:
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.946
pgr
Progesterone receptor.
    
 0.915
LOC109994130
CREB binding protein b.
   
 0.905
LOC109989542
CREB binding protein a.
   
 0.903
ENSLBEP00000017934
Nuclear receptor subfamily 1, group H, member 5.
    
 0.894
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
    
 0.894
LOC109985589
Vitamin D receptor a.
    
 0.883
LOC109993808
Vitamin D receptor b.
    
 0.883
carm1
Coactivator-associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.879
LOC109997736
Coactivator-associated arginine methyltransferase 1, like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.879
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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