STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmed9Transmembrane p24 trafficking protein 9. (223 aa)    
Predicted Functional Partners:
tmed10
Transmembrane p24 trafficking protein 10.
   
0.996
tmed2
Transmembrane p24 trafficking protein 2.
   
0.994
ENSLBEP00000009215
Transmembrane p24 trafficking protein 3.
   
0.949
LOC109991212
Transmembrane p24 trafficking protein 7.
   
0.949
LOC109995860
Uncharacterized protein.
   
 0.894
surf4
Surfeit 4.
   
 0.894
LOC109997470
SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family.
   
 0.794
LOC109982780
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
   
 0.794
sec22a
SEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family.
   
 0.779
sec22c
SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family.
   
 0.779
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.