STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109991453BCL2 family apoptosis regulator BOK b. (213 aa)    
Predicted Functional Partners:
apaf1
Apoptotic peptidase activating factor 1.
    
 0.915
bcl2l11
Uncharacterized protein.
    
 0.912
becn1
Beclin 1, autophagy related.
    
 0.910
bad
BCL2 associated agonist of cell death b.
   
 0.885
tpx2
TPX2 microtubule nucleation factor.
    
 0.850
prkn
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 0.749
pink1
PTEN induced kinase 1.
    
 0.736
bnip3
BCL2 interacting protein 3.
    
 0.705
LOC109998489
Zgc:73226.
    
 0.705
LOC109983369
BCL2 interacting protein 3 like a.
    
 0.678
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.