STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thap4THAP domain containing 4. (169 aa)    
Predicted Functional Partners:
LOC109993623
THAP-type domain-containing protein.
   
  
 0.551
LOC109977326
THAP domain containing 7.
   
  
 0.551
dtymk
Deoxythymidylate kinase (thymidylate kinase).
      
 0.489
ENSLBEP00000024328
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
    0.434
tmem11
Transmembrane protein 11.
   
    0.434
ENSLBEP00000016658
THAP domain containing 12a.
    
 
 0.425
LOC109999426
THAP domain containing 12b.
    
 
 0.425
ENSLBEP00000006129
Ankyrin repeat and MYND domain containing 1.
      
 0.422
ENSLBEP00000006156
Uncharacterized protein.
      
 0.422
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.