STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000025084RRM domain-containing protein. (265 aa)    
Predicted Functional Partners:
ENSLBEP00000025035
Spen family transcriptional repressor.
 
     0.923
LOC109975608
BTD domain-containing protein.
    
 
 0.767
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 
 0.767
LOC109992781
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 
 0.767
LOC110004880
Uncharacterized protein.
    
 
 0.654
LOC109978648
BTD domain-containing protein.
    
 
 0.654
wtap
WT1 associated protein.
    
 
 0.580
rhobtb2
Rho related BTB domain containing 2a.
    
  0.569
LOC110001707
Rho related BTB domain containing 4.
    
  0.569
LOC109993445
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
  0.528
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.