STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1431 aa)    
Predicted Functional Partners:
rgp1
GP1 homolog, RAB6A GEF complex partner 1.
    
 0.998
LOC109981429
RAB6A, member RAS oncogene family.
    
 0.934
RAB41
RAB41, member RAS oncogene family.
    
 0.934
LOC109991458
RAB6B, member RAS oncogene family.
    
 0.934
LOC109982466
RAB6B, member RAS oncogene family a.
    
 0.934
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.926
rab34
RAB34, member RAS oncogene family a.
    
 0.914
LOC109985225
RAB34, member RAS oncogene family b.
    
 0.914
arfrp1
ADP-ribosylation factor related protein 1.
    
 0.879
LOC109995691
RAB33B, member RAS oncogene family a.
    
 0.878
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.