STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc9DnaJ (Hsp40) homolog, subfamily C, member 9. (255 aa)    
Predicted Functional Partners:
LOC110001024
DNA helicase; Belongs to the MCM family.
   
 
 0.889
LOC110005464
DNA helicase; Belongs to the MCM family.
   
 
 0.889
LOC109987292
Heat shock protein 4a.
  
 0.740
LOC109994523
Heat shock protein 4b.
  
 0.740
hspa14
Heat shock protein 14; Belongs to the heat shock protein 70 family.
  
 0.735
LOC109975394
Heat shock protein 4 like.
  
 0.725
hspa4l
Heat shock protein 4 like.
  
 0.725
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
  
 0.720
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.712
dnajc1
DnaJ (Hsp40) homolog, subfamily C, member 1.
   
 0.711
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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