STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109993166G_PROTEIN_RECEP_F3_4 domain-containing protein. (826 aa)    
Predicted Functional Partners:
tas1r3
Taste receptor, type 1, member 3.
  
0.894
ENSLBEP00000033866
Uncharacterized protein.
    
  0.865
wdr90
WD repeat domain 90.
    
   0.724
LOC109999919
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
 0.633
pacrg
PARK2 co-regulated.
   
 
 0.619
ENSLBEP00000004591
NDK domain-containing protein.
    
 
 0.608
ENSLBEP00000030295
annotation not available
    
 
 0.608
efhb
Uncharacterized protein.
    
   0.602
LOC109982888
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
    
 0.590
gnat1
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
    
 0.590
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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