STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109990840SPARC-like 2. (219 aa)    
Predicted Functional Partners:
lum
Lumican.
   
  
 0.895
dcn
Decorin; May affect the rate of fibrils formation.
   
  
 0.860
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.698
LOC109976224
Uncharacterized protein.
     
 0.652
ENSLBEP00000018382
Uncharacterized protein.
     
 0.652
ENSLBEP00000018384
Uncharacterized protein.
     
 0.652
ENSLBEP00000018461
Uncharacterized protein.
     
 0.652
stab1
Stabilin 1.
     
 0.652
fam20b
FAM20B glycosaminoglycan xylosylkinase.
     
 0.647
LOC109989500
Apolipoprotein Ba.
   
 
  0.626
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.