STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000025496SH3 domain containing 19. (745 aa)    
Predicted Functional Partners:
sh3yl1
SH3 and SYLF domain containing 1.
   
   0.773
LOC109986402
Afadin, adherens junction formation factor a.
    
 0.747
ENSLBEP00000018511
Vta1 domain-containing protein.
    
   0.721
ENSLBEP00000018804
Vta1_C domain-containing protein.
    
   0.721
LOC109985881
NADPH oxidase organizer 1a.
   
 0.703
LOC109990431
NADPH oxidase organizer 1b.
   
 0.689
LOC109981953
Uncharacterized protein.
    
 0.682
LOC109987847
SH3 and PX domains 2Aa.
    
 0.682
ncf4
Neutrophil cytosolic factor 4.
    
0.682
LOC109975168
Neutrophil cytosolic factor 1.
    
0.682
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.