STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109982756Abhydrolase domain containing 17A. (321 aa)    
Predicted Functional Partners:
LOC109983413
Sterol carrier protein 2b.
    
 0.846
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.846
lyplal1
Lysophospholipase like 1.
     
 0.686
lypla2
Lysophospholipase 2.
     
 0.636
lypla1
Lysophospholipase 1.
     
 0.636
alg2
ALG2 alpha-1,3/1,6-mannosyltransferase.
  
 
 0.584
piga
Phosphatidylinositol glycan anchor biosynthesis, class A.
   
 
 0.575
alg1
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.
   
 
 0.575
pigw
Phosphatidylinositol-glycan biosynthesis class W protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor.
   
 
 0.575
LOC109985176
ALG11 alpha-1,2-mannosyltransferase.
   
 
 0.575
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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