STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000025772Reverse transcriptase domain-containing protein. (204 aa)    
Predicted Functional Partners:
kctd2
Potassium channel tetramerization domain containing 2.
    
  0.495
LOC109996986
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.495
LOC109975117
Potassium channel tetramerization domain containing 2.
    
  0.495
ube2i
Ubiquitin-conjugating enzyme E2Ia; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.495
ENSLBEP00000022035
Uncharacterized protein.
  
     0.494
ENSLBEP00000016764
Uncharacterized protein.
  
     0.484
ENSLBEP00000025729
Reverse transcriptase domain-containing protein.
  
     0.477
ENSLBEP00000018375
Uncharacterized protein.
  
     0.457
ENSLBEP00000028207
Uncharacterized protein.
  
     0.449
ENSLBEP00000030389
Uncharacterized protein.
  
     0.432
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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