STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109991492CARMIL_C domain-containing protein. (1385 aa)    
Predicted Functional Partners:
MSL3
MSL complex subunit 3.
    
 0.812
nxf1
Zgc:153681.
   
 0.798
LOC109988663
Protein S100; Belongs to the S-100 family.
    
 0.796
ENSLBEP00000011796
C-type lectin domain-containing protein.
    
 0.741
ENSLBEP00000033866
Uncharacterized protein.
   
  0.712
LOC109983404
Im:7152348.
   
 0.651
ENSLBEP00000011618
Tudor domain-containing protein.
    
 0.648
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.648
LOC109987332
Mastermind-like transcriptional coactivator 1.
    
 0.647
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.646
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.